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Assay category
8
Transcription
Assay
1690
ChIP-seq
1465
total RNA-seq
514
ATAC-seq
257
single cell RNA-seq
87
RNA microarray
74
snATAC-seq
71
DNase-seq
57
pCHi-C
32
Hi-C
10
MeRIP-seq
8
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
8
AMP
RFA
8
AMP
Experiment status
8
released
Genome assembly (visualization)
8
GRCh38
8
hg19
Organism
8
Homo sapiens
Biosample type
6
tissue
2
primary cell
Organ
3
adipose tissue
3
connective tissue
2
liver
2
pancreas
1
musculature of body
Life stage
embryonic
8
adult
Available data
8
bam
8
bigWig
8
tsv
Library made from
8
RNA
Date released
8
July, 2019
Lab
8
AMP-T2D consortium
Replication type
6
unreplicated
2
anisogenic
assay_slims!
DNA methylation
organ_slims!
blood
replicates.library.biosample.life_stage!
embryonic
Showing 8 of 8 results
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Experiment
DSR322WAZ
released
small RNA-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR043CMH
released
small RNA-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR467AXQ
released
small RNA-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR882SMA
released
small RNA-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR562PEN
released
small RNA-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR089OIU
released
small RNA-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR207MHZ
released
small RNA-seq
of skeletal muscle satellite cell
Homo sapiens
skeletal muscle satellite cell female adult (64 years) and male adult (21 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR483BAA
released
small RNA-seq
of mesenchymal stem cell of adipose
Homo sapiens
mesenchymal stem cell of adipose female adult (37 years) and female adult (42 years)
Lab:
AMP-T2D consortium
Project:
AMP