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Citing CMDGA
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Assay category
2
DNA binding
1
DNA accessibility
Assay
2
ChIP-seq
1
ATAC-seq
Project
3
AMP
RFA
2
AMP
1
AMP2
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
1
control
1
transcription factor
Biosample type
2
in vitro differentiated cells
1
tissue
Organ
2
connective tissue
1
pancreas
Life stage
2
unknown
1
adult
Available data
3
fastq
2
bam
2
bed bed3+
2
bigWig
1
bed broadPeak
1
bed narrowPeak
Platform
3
Illumina HiSeq 2000
Run type
2
single-ended
1
paired-ended
Read length (nt)
264
36
203
76
200
50
170
100
91
51
53
101
51
40
27
8
22
49
20
16
14
27
14
102
11
25
10
35
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
75
3
67
2
37
2
38
2
70
2
74
2
150
1
20
1
30
1
69
1
72
1
125
Library made from
3
DNA
Date released
2
August, 2017
1
October, 2017
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Replication type
3
anisogenic
assay_slims!
Transcription
Showing 3 of 3 results
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Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP
Experiment
TSTSR812164
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
EBF1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR465195
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP