Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
4
Transcription
Assay
381
ChIP-seq
299
total RNA-seq
128
ATAC-seq
49
pCHi-C
20
DNase-seq
11
RRBS
9
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
single cell RNA-seq
4
snATAC-seq
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
RNA microarray
1
FAIRE-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
4
AMP
2
T1D
RFA
4
AMP
2
T1D
Experiment status
6
released
Organism
6
Homo sapiens
Biosample type
2
cell line
2
in vitro differentiated cells
2
tissue
Organ
1
kidney
1
musculature of body
Life stage
221
adult
106
embryonic
38
child
7
newborn
6
unknown
Available data
2
tsv
Library made from
4
RNA
2
DNA
Date released
3
December, 2019
2
February, 2023
1
May, 2022
Lab
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Replication type
3
unreplicated
2
isogenic
1
anisogenic
Audit category:
2
audit script error
2
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
Experiment
DSR946SNV
released
single cell RNA-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR606NGC
released
single cell RNA-seq
of kidney
Homo sapiens
kidney
Lab:
AMP-T2D consortium
Project:
AMP