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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA binding
2
DNA accessibility
Assay
3
ChIP-seq
2
DNase-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
3
RNA binding protein
3
transcription factor
Biosample type
5
tissue
Organ
5
adipose tissue
5
connective tissue
Life stage
5
adult
Available data
19
bam
13
fastq
11
bigWig
6
bed narrowPeak
6
tsv
5
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Platform
4
Illumina HiSeq 4000
1
Illumina NextSeq 500
Run type
4
paired-ended
Read length (nt)
3
100
1
36
Library made from
5
DNA
Date released
3
October, 2018
1
June, 2019
1
November, 2018
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
assay_title!
CRISPR genome editing followed by DNA sequencing
Showing 5 of 5 results
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Experiment
DSR256LQY
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR694EMD
released
ChIP-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR324TNL
released
ChIP-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (37 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR172KUX
released
ChIP-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (54 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP