Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
6
DNA binding
Assay
6
ChIP-seq
2
DNase-seq
1
RRBS
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
6
Homo sapiens
Target of assay
3
transcription factor
2
control
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Biosample type
6
tissue
Organ
6
liver
Life stage
4
adult
3
child
2
unknown
Available data
6
bam
6
fastq
4
bed narrowPeak
4
bigWig
3
bigBed narrowPeak
1
bed bed3+
Platform
3
Illumina Genome Analyzer IIx
2
Illumina Genome Analyzer II
1
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
46
50
7
33
6
36
6
200
2
32
Mapped read length (nt)
1
36
Library made from
6
DNA
Date released
3
August, 2017
3
December, 2017
Lab
6
AMP-T2D consortium
Replication type
4
anisogenic
2
unreplicated
Audit category:
1
inconsistent control read length
assay_title!
CRISPRi RNA-seq
assembly!
hg18
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR981226
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
RAD21
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR485515
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR629646
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR190553
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999552
released
Audit warning
1
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP