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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
108
ChIP-seq
8
DNase-seq
6
single cell RNA-seq
6
total RNA-seq
5
Hi-C
4
WGBS
3
ATAC-seq
2
pCHi-C
1
FAIRE-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
152
pancreas
103
epithelium
75
kidney
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Life stage
3
adult
Available data
3
bam
3
bed narrowPeak
3
bigWig
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
100
Library made from
3
DNA
Date released
1
July, 2019
1
October, 2017
1
October, 2019
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
assay_title!
CRISPRi RNA-seq
organ_slims!
heart
Showing 3 of 3 results
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Experiment
DSR666PVB
released
ATAC-seq
of tibial artery
Homo sapiens
tibial artery male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR319CYE
released
ATAC-seq
of thoracic aorta
Homo sapiens
thoracic aorta male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR728326
released
ATAC-seq
of spleen
Homo sapiens
spleen female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP