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Citing CMDGA
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Assay category
5
DNA accessibility
Assay
52
total RNA-seq
31
WGBS
13
ChIP-seq
12
single cell RNA-seq
5
ATAC-seq
1
Hi-C
Project
3
AMP
2
HPAP
RFA
3
AMP
2
HPAP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
5
epithelium
5
pancreas
Life stage
4
adult
1
child
Available data
5
bigWig
5
fastq
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
Platform
3
Illumina HiSeq 2000
2
Illumina NextSeq 500
Run type
5
paired-ended
Read length (nt)
25
50
3
41
3
102
2
76
Library made from
5
DNA
Date released
August, 2020
3
September, 2018
2
September, 2020
Lab
3
AMP-T2D consortium
2
Klaus Kaestner, Upenn
Replication type
5
unreplicated
assay_title!
DNase-seq
month_released!
August, 2020
files.read_length!
50
Showing 5 of 5 results
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Experiment
DSR612YFT
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (31 year)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR816NEI
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (28 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR351IAS
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR005XVS
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (19 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR772FYU
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP