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Schema
Citing CMDGA
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Assay category
3
DNA accessibility
Assay
416
ChIP-seq
20
total RNA-seq
6
MeRIP-seq
6
pCHi-C
4
STARR-seq
3
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
DNase-seq
2
Hi-C
1
WGBS
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
55
primary cell
19
tissue
13
in vitro differentiated cells
3
cell line
Organ
2
epithelium
2
pancreas
1
liver
Life stage
2
unknown
1
adult
Available data
2
bigWig
1
bam
1
bed bed3
1
bed narrowPeak
1
tsv
Library made from
3
DNA
Date released
2
March, 2020
1
February, 2021
Lab
3
AMP-T2D consortium
Replication type
26
unreplicated
3
isogenic
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
assay_title!
FAIRE-seq
Showing 3 of 3 results
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Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR421SWP
released
Audit error
1
ATAC-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR293EIL
released
Audit error
1
ATAC-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP