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Citing CMDGA
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Assay category
6
DNA methylation
Assay
739
ChIP-seq
365
total RNA-seq
167
DNase-seq
37
ATAC-seq
16
single cell RNA-seq
10
small RNA-seq
6
WGBS
5
GRO-seq
4
Hi-C
2
FAIRE-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
Organism
6
Homo sapiens
Biosample type
5
tissue
1
cell line
Organ
3
heart
1
adipose tissue
1
connective tissue
1
limb
1
liver
1
musculature of body
Life stage
adult
4
child
2
embryonic
Available data
6
bam
6
bed bedMethyl
6
bigBed bedMethyl
6
bigWig
5
fastq
4
zippedFastqFolder
2
tsv
Platform
1
Illumina HiSeq 2500
1
Illumina HiSeq X Ten
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
100
1
151
Library made from
6
DNA
Date released
4
July, 2019
1
August, 2017
1
November, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
isogenic
assay_title!
MPRA
replicates.library.biosample.life_stage!
adult
Showing 6 of 6 results
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Experiment
DSR372NHK
released
WGBS
of muscle of leg
Homo sapiens
muscle of leg female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR790KQG
released
WGBS
of heart right ventricle
Homo sapiens
heart right ventricle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR108KUP
released
WGBS
of heart left ventricle
Homo sapiens
heart left ventricle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR583GYT
released
WGBS
of heart
Homo sapiens
heart embryo (101 day)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR031119
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP