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Citing CMDGA
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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Target of assay
4
histone
4
histone modification
4
narrow histone mark
1
control
1
transcription factor
Biosample type
4
primary cell
2
in vitro differentiated cells
Organ
4
epithelium
4
pancreas
2
connective tissue
Life stage
6
unknown
Available data
6
bam
6
fastq
5
bed narrowPeak
5
bigWig
1
bed bed3+
Platform
4
Illumina Genome Analyzer IIx
2
Illumina Genome Analyzer II
Run type
6
single-ended
Read length (nt)
264
36
252
101
235
100
206
50
204
76
91
51
61
8
59
75
51
40
33
90
27
43
23
98
22
49
20
16
20
28
15
26
14
27
14
102
11
25
10
35
10
91
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
94
3
67
2
37
2
38
2
70
2
74
2
97
2
150
1
20
1
30
1
72
1
99
1
105
1
110
1
125
1
140
1
147
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
anisogenic
Audit category:
4
inconsistent control read length
assay_title!
pCHi-C
Showing 6 of 6 results
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Experiment
TSTSR247243
released
Audit warning
1
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978899
released
Audit warning
1
ChIP-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR422389
released
Audit warning
1
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR888854
released
Audit warning
1
ChIP-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR080417
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR182504
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP