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Citing CMDGA
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Assay category
5
DNA accessibility
Assay
296
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
1
FAIRE-seq
0
RNA microarray
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
2
primary cell
2
tissue
1
in vitro differentiated cells
Organ
1
connective tissue
1
liver
1
pancreas
Life stage
4
unknown
1
adult
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
3
fastq
2
bed broadPeak
2
bigBed broadPeak
Platform
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
2
paired-ended
2
single-ended
Read length (nt)
2
36
1
20
1
101
Library made from
5
DNA
Date released
187
June, 2019
84
February, 2021
10
October, 2019
9
November, 2018
5
August, 2017
2
December, 2019
1
August, 2021
1
November, 2020
Lab
5
AMP-T2D consortium
Replication type
3
isogenic
1
anisogenic
1
unreplicated
assay_title!
small RNA-seq
Showing 5 of 5 results
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Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP