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Assay category
4
DNA accessibility
3
Transcription
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
GRCh38
4
hg19
Organism
7
Homo sapiens
Target of assay
3
control
Biosample type
4
tissue
3
primary cell
Organ
226
pancreas
173
epithelium
140
heart
139
kidney
52
blood vessel
52
vasculature
47
artery
29
connective tissue
28
eye
24
liver
12
bone element
12
skeleton
9
lung
8
limb
7
brain
6
adipose tissue
2
musculature of body
1
blood
1
bodily fluid
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Life stage
5
adult
1
child
1
embryonic
Available data
5
bam
5
bigWig
3
tsv
1
bed bed3
1
fastq
Platform
1
Illumina HiSeq 2500
Run type
1
single-ended
Read length (nt)
1
50
Library made from
7
DNA
Date released
4
July, 2019
1
February, 2023
1
October, 2017
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
1
anisogenic
Showing 7 of 7 results
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Experiment
DSR393NZK
released
ATAC-seq
of brain
Homo sapiens
brain embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR257QHD
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (61 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR957CBL
released
single cell RNA-seq
of Purkinje cell
Homo sapiens
Purkinje cell male adult (20 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR519VXU
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male adult (20 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR344ZYZ
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male child (6 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR992NPF
released
ATAC-seq
of posterior cingulate cortex
Homo sapiens
posterior cingulate cortex male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP