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Citing CMDGA
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Assay category
4
DNA accessibility
2
Transcription
Assay
204
DNase-seq
53
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
primary cell
Organ
4
connective tissue
Life stage
4
unknown
1
adult
1
newborn
Available data
1463
bam
1420
bigWig
1335
tsv
304
fastq
278
bed narrowPeak
64
xls
62
txt
39
zippedFastqFolder
27
bigBed narrowPeak
12
bed bed3
7
bed bedgraph
6
bed bed3+
2
bed broadPeak
Library made from
4
DNA
2
RNA
Date released
4
February, 2023
2
May, 2021
Lab
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Replication type
3
anisogenic
3
unreplicated
Audit category:
2
inconsistent ontology term
Showing 6 of 6 results
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Experiment
DSR657VBF
released
ATAC-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR864VPS
released
Audit error
1
ATAC-seq
of immature adipocyte
Homo sapiens
immature adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR581RWT
released
Audit error
1
ATAC-seq
of immature adipocyte
Homo sapiens
immature adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR533BQP
released
ATAC-seq
of preadipocyte
Homo sapiens
preadipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR776ABK
released
total RNA-seq
of CD8-positive, alpha-beta T cell
Homo sapiens
CD8-positive, alpha-beta T cell female newborn (0-5 years)
Lab:
Kyle Gaulton, UCSD
Project:
AMP
Experiment
DSR243PTW
released
total RNA-seq
of CD8-positive, alpha-beta T cell
Homo sapiens
CD8-positive, alpha-beta T cell male adult
Lab:
Kyle Gaulton, UCSD
Project:
AMP