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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
344
ChIP-seq
110
total RNA-seq
27
single cell RNA-seq
4
ATAC-seq
4
DNase-seq
1
Hi-C
Project
4
AMP
RFA
3
AMP
1
AMP2
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Organ
4
pancreas
Life stage
4
adult
Available data
4
bigWig
4
fastq
3
bam
3
bed narrowPeak
1
bed broadPeak
Platform
27
HiSeq HighOutput V4
23
Illumina HiSeq 4000
18
Illumina NextSeq 500
12
Illumina NovaSeq 6000
4
Illumina HiSeq 2000
2
Illumina HiSeq 2500
Run type
4
paired-ended
Read length (nt)
3
100
1
125
Library made from
4
DNA
Date released
September, 2018
4
October, 2017
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Replication type
3
unreplicated
1
anisogenic
month_released!
September, 2018
Showing 4 of 4 results
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Experiment
TSTSR912062
released
ATAC-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR684264
released
ATAC-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR165872
released
ATAC-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP