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Citing CMDGA
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Assay category
5
DNA accessibility
Assay
77
ChIP-seq
6
DNase-seq
5
ATAC-seq
1
pCHi-C
1
single cell RNA-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
2
adipose tissue
2
connective tissue
1
liver
1
pancreas
1
spleen
Life stage
5
adult
Available data
5
bam
5
bed narrowPeak
5
bigWig
5
fastq
2
bigBed narrowPeak
Platform
17
Illumina HiSeq 2000
8
Illumina NextSeq 500
5
Illumina HiSeq 4000
1
Illumina HiSeq 2500
Run type
5
paired-ended
Read length (nt)
5
100
Library insert size (nt)
1
150-250
Library made from
5
DNA
Date released
3
October, 2017
2
August, 2017
Lab
18
Kyle Gaulton, UCSD
5
AMP-T2D consortium
Replication type
5
unreplicated
Showing 5 of 5 results
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Experiment
TSTSR824123
released
ATAC-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR914451
released
ATAC-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR728326
released
ATAC-seq
of spleen
Homo sapiens
spleen female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP