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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA accessibility
3
3D chromatin structure
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
4
tissue
3
primary cell
Organ
161
pancreas
111
epithelium
76
kidney
51
blood vessel
51
vasculature
50
heart
45
artery
28
eye
27
liver
26
connective tissue
12
bone element
12
limb
12
skeleton
7
brain
7
musculature of body
6
adipose tissue
2
vein
1
blood
1
bodily fluid
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Life stage
3
adult
3
unknown
1
embryonic
Available data
5
bigWig
3
bed bed3+
3
hdf5
2
bam
1
bed bed3
1
fastq
Platform
1
Illumina HiSeq 2500
Run type
1
single-ended
Read length (nt)
1
50
Library made from
7
DNA
Date released
4
July, 2019
1
February, 2023
1
October, 2017
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
1
anisogenic
Showing 7 of 7 results
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Experiment
DSR393NZK
released
ATAC-seq
of brain
Homo sapiens
brain embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR257QHD
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (61 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR992NPF
released
ATAC-seq
of posterior cingulate cortex
Homo sapiens
posterior cingulate cortex male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP