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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
1
Hi-C
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
1
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Biosample type
1
primary cell
1
tissue
Organ
1
pancreas
Life stage
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
2
bed broadPeak
2
tagAlign
bigBed broadPeak
Platform
2
Illumina HiSeq 2000
Run type
2
single-ended
1
paired-ended
Read length (nt)
2
36
1
76
Library made from
1
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
43
inconsistent control read length
9
inconsistent control run_type
2
inconsistent assembly
files.file_type!
bigBed broadPeak
Showing 2 of 2 results
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Experiment
TSTSR410352
released
Audit warning
3
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR676937
released
Audit warning
1
ChIP-seq
of pancreas
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP