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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
2
RNA binding protein
2
transcription factor
Biosample type
1
cell line
1
primary cell
Organ
1
liver
Life stage
1
child
1
unknown
Available data
16
bam
16
bigWig
16
fastq
15
bed broadPeak
15
bed narrowPeak
15
bigBed broadPeak
15
bigBed narrowPeak
tagAlign
Platform
365
Illumina HiSeq 2000
136
Illumina HiSeq 2500
112
Illumina Genome Analyzer IIx
104
Illumina Genome Analyzer
77
Illumina HiSeq 4000
20
Illumina Genome Analyzer II
8
HiSeq 1500
7
MiSeq
2
Applied Biosystems SOLiD System 3 Plus
2
Illumina Genome Analyzer IIe
1
Illumina Genome Analyzer I
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent control read length
files.file_type!
tagAlign
Showing 2 of 2 results
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Experiment
TSTSR310667
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP