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Citing CMDGA
Clear Filters
Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
1
chromatin remodeller
1
transcription factor
Biosample type
4
primary cell
1
cell line
Organ
4
pancreas
1
liver
Life stage
4
adult
1
child
Available data
5
bam
5
bigWig
5
fastq
2
bed narrowPeak
1
bigBed narrowPeak
Platform
5
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
5
single-ended
Read length (nt)
249
36
193
76
133
100
128
50
53
51
51
40
14
27
11
25
10
101
9
35
7
33
7
49
6
200
5
32
4
44
4
61
4
75
3
67
2
37
2
38
2
70
2
74
1
30
1
72
Library made from
5
DNA
Date released
3
August, 2017
1
November, 2018
1
September, 2018
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
isogenic
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent control read length
Showing 5 of 5 results
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Experiment
TSTSR796ABI
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
ASH2L
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR248LEQ
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell female adult (48 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR690557
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR179007
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR846115
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP