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Citing CMDGA
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Assay category
6
DNA binding
Assay
48
ATAC-seq
6
ChIP-seq
1
FAIRE-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Target of assay
5
histone
5
histone modification
3
broad histone mark
2
narrow histone mark
1
control
Biosample type
6
tissue
Organ
99
liver
6
pancreas
5
blood
5
bodily fluid
5
connective tissue
5
embryo
2
adipose tissue
1
epithelium
Life stage
4
adult
2
unknown
Available data
6
bam
6
fastq
5
bed narrowPeak
5
bigWig
4
bigBed narrowPeak
Platform
4
Illumina HiSeq 2000
2
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
50
36
48
51
20
76
13
100
6
50
5
49
4
44
4
61
1
72
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
unreplicated
Audit category:
4
inconsistent control read length
Showing 6 of 6 results
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Experiment
TSTSR813852
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR532334
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR444776
released
Audit warning
1
ChIP-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Target:
H3K9me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR387071
released
Audit warning
1
ChIP-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR387352
released
Audit warning
1
ChIP-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR580423
released
Audit warning
1
ChIP-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP