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Assay category
1
DNA binding
Assay
1328
total RNA-seq
339
single cell RNA-seq
87
RNA microarray
18
small RNA-seq
10
MeRIP-seq
5
STARR-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
ChIP-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snATAC-seq
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
1
tissue
Organ
1
pancreas
Available data
1
bam
1
bed broadPeak
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
1
tagAlign
Platform
Illumina HiSeq 2000
1
Illumina Genome Analyzer
Run type
1
single-ended
Read length (nt)
1
36
Library made from
DNA
Date released
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
unreplicated
organ_slims!
blood
replicates.library.nucleic_acid_term_name!
DNA
files.platform.term_name!
Illumina HiSeq 2000
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Experiment
TSTSR319502
released
ChIP-seq
of pancreas
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP