Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA accessibility
1
DNA sequencing
Assay
1533
total RNA-seq
546
ChIP-seq
363
single cell RNA-seq
253
ATAC-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
0
FAIRE-seq
Project
4
AMP
RFA
3
AMP
1
AMP2
Experiment status
4
released
Organism
4
Homo sapiens
Biosample type
2
primary cell
1
cell line
1
tissue
Organ
2
epithelium
2
kidney
2
liver
Life stage
3
adult
1
unknown
Available data
214
bam
bed narrowPeak
214
bigBed narrowPeak
214
bigWig
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
14
fastq
1
tar
1
vcf
Library made from
4
DNA
Date released
2
October, 2019
1
August, 2017
1
August, 2021
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
anisogenic
2
unreplicated
files.file_type!
bed narrowPeak
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
Experiment
DSR246XUG
released
whole genome sequencing assay
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR920RBU
released
DNase-seq
of kidney glomerular epithelial cell
Homo sapiens
kidney glomerular epithelial cell male adult (46 years) and male adult (62 years) and male adult (63 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR290FAD
released
DNase-seq
of kidney tubule cell
Homo sapiens
kidney tubule cell female adult (80 years) and male adult (62 years) and male adult (63 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP