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Assay category
5
DNA accessibility
Assay
1525
ChIP-seq
1288
total RNA-seq
175
ATAC-seq
100
single cell RNA-seq
18
WGBS
18
small RNA-seq
5
DNase-seq
5
FAIRE-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
2
primary cell
1
cell line
1
in vitro differentiated cells
1
tissue
Organ
1
connective tissue
1
epithelium
1
kidney
1
pancreas
Life stage
4
unknown
1
child
Available data
209
bam
209
bed narrowPeak
209
bigBed narrowPeak
209
bigWig
206
bed broadPeak
206
bigBed broadPeak
bed bed3+
12
fastq
Platform
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
2
paired-ended
2
single-ended
Read length (nt)
2
36
1
20
1
101
Library made from
5
DNA
Date released
4
August, 2017
1
October, 2019
Lab
5
AMP-T2D consortium
Replication type
4
isogenic
1
anisogenic
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Showing 5 of 5 results
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Experiment
DSR366LGT
released
DNase-seq
of glomerular visceral epithelial cell
Homo sapiens
glomerular visceral epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP