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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
537
ChIP-seq
189
total RNA-seq
22
ATAC-seq
5
WGBS
4
DNase-seq
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
8
connective tissue
6
pancreas
4
artery
4
eye
4
liver
2
nerve
2
vein
1
adipose tissue
Life stage
2
adult
1
embryonic
1
unknown
Available data
3
bam
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
1
fastq
Platform
Illumina HiSeq 4000
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
4
DNA
Date released
2
June, 2019
1
August, 2017
1
November, 2018
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
anisogenic
files.platform.term_name!
Illumina HiSeq 4000
Showing 4 of 4 results
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Experiment
DSR059MSK
released
DNase-seq
of hepatocyte
Homo sapiens
hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR762OSH
released
DNase-seq
of hepatic stellate cell
Homo sapiens
hepatic stellate cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP