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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
694
ChIP-seq
113
total RNA-seq
76
single cell RNA-seq
6
WGBS
5
GRO-seq
4
RRBS
2
DNase-seq
2
FAIRE-seq
1
ATAC-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
1
brain
1
pancreas
Life stage
1
embryonic
1
unknown
Available data
199
bam
199
bed narrowPeak
199
bigBed narrowPeak
199
bigWig
196
bed bed3+
196
bed broadPeak
196
bigBed broadPeak
2
fastq
Platform
1
Illumina Genome Analyzer
1
Illumina HiSeq 2000
Run type
paired-ended
3
single-ended
Read length (nt)
1
20
1
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
1
unreplicated
files.run_type!
paired-ended
Showing 2 of 2 results
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Experiment
TSTSR021OZY
released
DNase-seq
of brain
Homo sapiens
brain male embryo (105 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP