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Citing CMDGA
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Assay category
7
DNA accessibility
Assay
474
total RNA-seq
131
ChIP-seq
23
ATAC-seq
7
DNase-seq
6
WGBS
4
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
6
hg19
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Organ
81
kidney
36
limb
33
musculature of body
31
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
7
connective tissue
6
pancreas
4
artery
4
eye
3
liver
2
nerve
2
vein
1
adipose tissue
Life stage
3
adult
3
unknown
1
embryonic
Available data
7
bam
7
bed bed3+
7
bed broadPeak
7
bed narrowPeak
7
bigBed broadPeak
7
bigBed narrowPeak
7
bigWig
Run type
paired-ended
Library made from
7
DNA
Date released
6
June, 2019
1
November, 2020
Lab
7
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
1
anisogenic
Audit category:
1
inconsistent ontology term
files.run_type!
paired-ended
Showing 7 of 7 results
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Experiment
DSR457QKP
released
DNase-seq
of osteoblast
Homo sapiens
osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR256LQY
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR110FEN
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female embryo (94 days) and female embryo (98 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR921CZK
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR712MHV
released
Audit error
1
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR507IHX
released
DNase-seq
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR762OSH
released
DNase-seq
of hepatic stellate cell
Homo sapiens
hepatic stellate cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP