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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
153
ATAC-seq
125
ChIP-seq
49
pCHi-C
48
total RNA-seq
19
RRBS
16
Hi-C
12
snATAC-seq
10
MeRIP-seq
5
single cell RNA-seq
4
FAIRE-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
2
Capture-C
2
snDrop-seq
1
DNAme array
1
WGBS
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
GRCh38
31
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Organ
2
epithelium
2
kidney
Life stage
2
adult
1
unknown
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
Run type
paired-ended
1
single-ended
Library made from
3
DNA
Date released
2
October, 2019
1
August, 2017
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
isogenic
unreplicated
files.run_type!
paired-ended
replication_type!
unreplicated
assembly!
GRCh38
Showing 3 of 3 results
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Experiment
DSR920RBU
released
DNase-seq
of kidney glomerular epithelial cell
Homo sapiens
kidney glomerular epithelial cell male adult (46 years) and male adult (62 years) and male adult (63 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR290FAD
released
DNase-seq
of kidney tubule cell
Homo sapiens
kidney tubule cell female adult (80 years) and male adult (62 years) and male adult (63 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP