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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
452
ChIP-seq
5
total RNA-seq
3
DNase-seq
2
WGBS
1
ATAC-seq
1
Hi-C
1
RRBS
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
3
liver
3
pancreas
2
brain
2
connective tissue
1
adipose tissue
1
spleen
Life stage
2
embryonic
1
adult
Available data
5
bam
5
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
5
bigWig
3
fastq
Platform
2
Illumina HiSeq 4000
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
3
paired-ended
Read length (nt)
3
36
Library made from
3
DNA
Date released
3
November, 2018
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
anisogenic
Showing 3 of 3 results
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Experiment
TSTSR678CGC
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP