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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
63
ChIP-seq
18
total RNA-seq
15
ATAC-seq
3
DNase-seq
3
WGBS
2
small RNA-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Organ
13
brain
7
heart
7
pancreas
5
blood vessel
5
epithelium
5
kidney
5
vasculature
4
artery
4
connective tissue
4
limb
3
liver
2
adipose tissue
2
nerve
1
spleen
Life stage
3
adult
2
embryonic
1
unknown
Available data
2
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
3
DNA
Date released
1
August, 2017
1
June, 2019
1
November, 2018
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
Showing 3 of 3 results
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Experiment
DSR762OSH
released
DNase-seq
of hepatic stellate cell
Homo sapiens
hepatic stellate cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR678CGC
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP