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Assay category
2
DNA accessibility
Assay
1828
ChIP-seq
1489
total RNA-seq
525
ATAC-seq
360
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
63
WGBS
57
pCHi-C
26
Hi-C
10
MeRIP-seq
6
RRBS
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
2
pancreas
Life stage
1
adult
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
fastq
tar
Platform
2
Illumina Genome Analyzer I
Run type
2
single-ended
Read length (nt)
1
35
1
50
Library made from
2
DNA
Date released
July, 2019
1
August, 2017
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
1
unreplicated
month_released!
July, 2019
files.file_type!
tar
Showing 2 of 2 results
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Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP