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Assay category
2
DNA accessibility
Assay
742
ChIP-seq
365
total RNA-seq
160
DNase-seq
87
ATAC-seq
16
single cell RNA-seq
12
Hi-C
11
RRBS
10
small RNA-seq
2
Capture-C
2
FAIRE-seq
1
snATAC-seq
Project
4
AMP
RFA
2
AMP
2
AMP2
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
1
tissue
Organ
2
connective tissue
1
blood vessel
1
epithelium
1
pancreas
1
vasculature
1
vein
Life stage
adult
3
unknown
1
newborn
Available data
2
bam
2
bed bed3+
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
fastq
1
tar
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
35
Library made from
4
DNA
Date released
2
August, 2021
1
August, 2017
1
October, 2019
Lab
2
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Replication type
2
anisogenic
1
isogenic
1
unreplicated
replicates.library.biosample.life_stage!
adult
Showing 4 of 4 results
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Experiment
DSR976OUK
released
Capture-C
of osteoblast
Homo sapiens
osteoblast
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR621POD
released
Capture-C
of adipocyte
Homo sapiens
adipocyte
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP