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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
755
ChIP-seq
195
ATAC-seq
60
total RNA-seq
49
DNase-seq
49
pCHi-C
19
Hi-C
19
RRBS
12
snATAC-seq
8
WGBS
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
single cell RNA-seq
2
Capture-C
1
DNAme array
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Organ
1
blood vessel
1
brain
1
epithelium
1
kidney
1
pancreas
1
vasculature
1
vein
Life stage
3
adult
1
newborn
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
1
fastq
1
tar
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
50
Library made from
4
DNA
Date released
2
July, 2019
1
November, 2018
1
October, 2019
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
1
isogenic
unreplicated
replication_type!
unreplicated
Showing 4 of 4 results
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Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR821PLA
released
FAIRE-seq
of kidney
Homo sapiens
kidney female adult (30 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR405QWU
released
FAIRE-seq
of frontal cortex
Homo sapiens
frontal cortex female adult (67 years) and female adult (80 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP