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Assay
1806
ChIP-seq
1519
total RNA-seq
531
ATAC-seq
363
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
53
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
GRO-seq
3
snDrop-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg18
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
stem cell
Organ
embryo
Life stage
3
unknown
Available data
3
bigWig
3
fastq
Platform
3
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
3
50
Library made from
3
DNA
Date released
3
January, 2018
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
biosample_type!
stem cell
organ_slims!
embryo
Showing 3 of 3 results
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Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641241
released
GRO-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR626869
released
GRO-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Lab:
AMP-T2D consortium
Project:
AMP