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Assay
1282
total RNA-seq
1097
ChIP-seq
336
ATAC-seq
274
single cell RNA-seq
163
DNase-seq
87
RNA microarray
72
snATAC-seq
67
WGBS
15
Hi-C
8
pCHi-C
7
small RNA-seq
4
GRO-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
FAIRE-seq
1
MPRA
1
STARR-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
hg18
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
cell line
1
stem cell
Organ
embryo
Life stage
4
unknown
Available data
4
bigWig
4
fastq
1
txt
Platform
4
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
4
50
Library made from
4
DNA
Date released
4
January, 2018
1
October, 2022
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
organ_slims!
embryo
Showing 5 of 5 results
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Experiment
DSR700KTH
released
MPRA
of MIN6
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641241
released
GRO-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR626869
released
GRO-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR770475
released
GRO-seq
of hESC
Homo sapiens
hESC (embryoid body cell)
Lab:
AMP-T2D consortium
Project:
AMP