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Citing CMDGA
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Assay category
1
DNA accessibility
Assay
273
ChIP-seq
106
total RNA-seq
34
single cell RNA-seq
6
WGBS
5
GRO-seq
1
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
hg18
1
GRCh38
1
hg19
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
stem cell
1
tissue
Organ
1
brain
1
embryo
Life stage
5
unknown
1
embryonic
Available data
6
bigWig
6
fastq
1
bam
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Platform
5
Illumina HiSeq 2500
1
Illumina HiSeq 2000
Run type
7
paired-ended
6
single-ended
Read length (nt)
5
50
1
36
Library made from
6
DNA
Date released
5
January, 2018
1
November, 2018
Lab
6
AMP-T2D consortium
Replication type
6
unreplicated
1
anisogenic
1
isogenic
Showing 6 of 6 results
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Experiment
TSTSR021OZY
released
DNase-seq
of brain
Homo sapiens
brain male embryo (105 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171680
released
GRO-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641241
released
GRO-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR626869
released
GRO-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR770475
released
GRO-seq
of hESC
Homo sapiens
hESC (embryoid body cell)
Lab:
AMP-T2D consortium
Project:
AMP