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Schema
Citing CMDGA
Clear Filters
Assay category
1
3D chromatin structure
Assay
426
ChIP-seq
108
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
6
primary cell
6
tissue
1
cell line
Organ
1
pancreas
Life stage
1
adult
Available data
bedpe bed3+
2
hic
1
bed bed3+
1
bigWig
1
hdf5
Read length (nt)
1
50
Library made from
1
DNA
Date released
1
October, 2019
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
Audit category:
1
inconsistent assembly
files.read_length!
50
files.file_type!
bedpe bed3+
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Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP