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Citing CMDGA
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Assay category
3
3D chromatin structure
3
Transcription
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
small RNA-seq
3
ATAC-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
3
GRCh38
Organism
6
Homo sapiens
Target of assay
3
control
Biosample type
6
primary cell
Organ
96
heart
83
pancreas
78
epithelium
65
kidney
11
blood vessel
11
vasculature
9
lung
7
musculature of body
6
brain
5
connective tissue
4
limb
4
liver
2
artery
2
vein
Life stage
3
unknown
2
adult
1
child
Available data
6
bigWig
3
bam
3
bed bed3+
3
hdf5
3
tsv
Library made from
6
DNA
Date released
6
July, 2019
Lab
6
AMP-T2D consortium
Replication type
6
isogenic
files.read_length!
50
Showing 6 of 6 results
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Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR957CBL
released
single cell RNA-seq
of Purkinje cell
Homo sapiens
Purkinje cell male adult (20 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR519VXU
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male adult (20 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR344ZYZ
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male child (6 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP