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Schema
Citing CMDGA
Clear Filters
Assay category
2
3D chromatin structure
Assay
1659
ChIP-seq
1197
total RNA-seq
337
ATAC-seq
214
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
16
WGBS
6
RRBS
5
GRO-seq
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
Hi-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Organ
1
liver
1
pancreas
Life stage
1
adult
1
child
Available data
hic
15
bedpe bed3+
1
bed bed3+
1
bigWig
1
fastq
1
hdf5
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
50
Library made from
2
DNA
Date released
July, 2019
1
December, 2018
1
October, 2019
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
isogenic
Audit category:
1
inconsistent assembly
files.file_type!
hic
month_released!
July, 2019
Showing 2 of 2 results
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Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR542TGF
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP