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Citing CMDGA
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Assay category
4
3D chromatin structure
Assay
96
ChIP-seq
61
total RNA-seq
46
ATAC-seq
8
DNase-seq
6
single cell RNA-seq
4
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
brain
3
heart
2
vein
1
connective tissue
1
kidney
Life stage
3
unknown
1
adult
Available data
3
hic
2
bedpe bed3+
1
bed bed3+
1
bigWig
1
hdf5
Library made from
4
DNA
Date released
2
March, 2020
1
July, 2019
1
October, 2019
Lab
4
AMP-T2D consortium
Replication type
2
unreplicated
1
anisogenic
1
isogenic
Audit category:
1
audit script error
organ_slims!
brain
Showing 4 of 4 results
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Experiment
DSR073ZJB
released
Hi-C
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP