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Schema
Citing CMDGA
Clear Filters
Assay category
6
3D chromatin structure
Assay
403
ChIP-seq
270
ATAC-seq
262
single cell RNA-seq
218
total RNA-seq
87
RNA microarray
83
snATAC-seq
70
WGBS
51
pCHi-C
25
DNase-seq
10
MeRIP-seq
6
Hi-C
5
GRO-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Project
5
AMP
1
ITG
RFA
4
AMP
1
AMP2
1
ITG
Experiment status
6
released
Genome assembly (visualization)
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
5
tissue
1
primary cell
Organ
4
limb
4
musculature of body
liver
1
pancreas
Life stage
6
adult
Available data
1
bedpe bed3+
1
hic
Library made from
6
DNA
Date released
4
July, 2019
1
August, 2021
1
March, 2023
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
Replication type
4
unreplicated
2
anisogenic
organ_slims!
liver
assembly!
hg19
Showing 6 of 6 results
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Experiment
DSR798SDK
released
Hi-C
of chondrocytes
Homo sapiens
chondrocytes female adult (58 years) and female adult (63 years) and female adult (65 years) and female adult (73 years) and female adult (75 years) and male adult (61 year) and male adult (72 years) and male adult (75 years)
Lab:
ITG
Project:
ITG
Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR998CGE
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR851SPB
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR920BPY
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR163ZFS
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP