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Schema
Citing CMDGA
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Assay category
2
3D chromatin structure
Assay
534
total RNA-seq
205
ChIP-seq
100
ATAC-seq
90
DNase-seq
68
single cell RNA-seq
7
pCHi-C
6
WGBS
6
snATAC-seq
5
RRBS
4
small RNA-seq
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
Hi-C
2
STARR-seq
1
FAIRE-seq
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Life stage
1
adult
1
unknown
Available data
1
bed bed3+
1
bigWig
1
hdf5
1
hic
Library made from
2
DNA
Date released
1
August, 2021
1
July, 2019
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Replication type
1
isogenic
1
unreplicated
Showing 2 of 2 results
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Experiment
DSR145PQU
released
Hi-C
of kidney
Homo sapiens
kidney female adult (63 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP