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Schema
Citing CMDGA
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Assay category
2
3D chromatin structure
Assay
114
total RNA-seq
101
ATAC-seq
79
ChIP-seq
41
WGBS
10
single cell RNA-seq
4
DNase-seq
2
Capture-C
2
Hi-C
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Organ
6
musculature of body
4
limb
2
blood vessel
2
epithelium
2
heart
2
liver
2
pancreas
2
vasculature
1
kidney
1
vein
Life stage
1
embryonic
1
unknown
Available data
2
hic
1
bedpe bed3+
Library made from
2
DNA
Date released
1
November, 2019
1
October, 2019
Lab
2
AMP-T2D consortium
Replication type
4
anisogenic
2
isogenic
2
unreplicated
Audit category:
1
audit script error
1
inconsistent ontology term
Showing 2 of 2 results
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Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP