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Assay
1831
ChIP-seq
1471
total RNA-seq
519
ATAC-seq
363
single cell RNA-seq
212
DNase-seq
84
snATAC-seq
75
WGBS
56
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
2
T1D
RFA
3
AMP
2
T1D
Experiment status
5
released
Organism
4
Homo sapiens
Biosample type
3
tissue
2
cell line
Organ
bone element
2
kidney
1
adipose tissue
1
connective tissue
1
epithelium
Life stage
4
unknown
Available data
2
tsv
Library made from
2
DNA
2
RNA
Date released
2
December, 2019
2
February, 2023
1
August, 2021
Lab
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Replication type
5
unreplicated
Audit category:
2
audit script error
organ_slims!
bone element
Showing 5 of 5 results
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Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR479AEW
released
Audit error
1
RNA microarray
of kidney interstitium
Homo sapiens
kidney interstitium
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR187TER
released
Audit error
1
RNA microarray
of renal glomerulus
Homo sapiens
renal glomerulus
Lab:
AMP-T2D consortium
Project:
AMP