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Citing CMDGA
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Assay category
7
DNA methylation
Assay
591
ChIP-seq
195
total RNA-seq
39
DNase-seq
24
ATAC-seq
10
Hi-C
7
RRBS
6
WGBS
5
small RNA-seq
4
pCHi-C
2
STARR-seq
2
single cell RNA-seq
1
snATAC-seq
1
whole genome sequencing assay
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
hg19
Organism
7
Homo sapiens
Biosample type
5
tissue
2
primary cell
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Life stage
5
adult
2
unknown
Available data
5
bed bedMethyl
5
bigBed bedMethyl
3
fastq
Platform
3
Illumina Genome Analyzer IIx
Run type
3
single-ended
Read length (nt)
3
36
Library made from
7
DNA
Date released
5
August, 2017
2
July, 2019
Lab
7
AMP-T2D consortium
Replication type
5
isogenic
2
unreplicated
Showing 7 of 7 results
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Experiment
DSR488BRN
released
RRBS
of skeletal muscle cell
Homo sapiens
skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR467ULV
released
RRBS
of hepatocyte
Homo sapiens
hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP