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Citing CMDGA
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Assay category
6
DNA methylation
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
5
tissue
1
primary cell
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Life stage
4
adult
1
embryonic
1
unknown
Available data
4
bed bedMethyl
4
bigBed bedMethyl
2
fastq
1
bam
1
bigWig
Platform
2
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
2
36
Library made from
6
DNA
Date released
4
August, 2017
2
July, 2019
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
Showing 6 of 6 results
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Experiment
DSR372NHK
released
WGBS
of muscle of leg
Homo sapiens
muscle of leg female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR488BRN
released
RRBS
of skeletal muscle cell
Homo sapiens
skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP