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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Project
5
AMP
RFA
4
AMP
1
AMP2
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
1
cell line
1
tissue
Organ
1
connective tissue
1
epithelium
1
heart
1
kidney
1
limb
1
musculature of body
1
vasculature
Life stage
4
unknown
1
embryonic
Available data
4
bam
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
Library made from
4
DNA
1
RNA
Date released
4
June, 2019
1
August, 2021
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
3
isogenic
2
unreplicated
Audit category:
5
inconsistent ontology term
Showing 5 of 5 results
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Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR027ICT
released
Audit error
1
DNase-seq
of muscle of leg
Homo sapiens
muscle of leg female embryo (115 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR645FWC
released
Audit error
1
DNase-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR712MHV
released
Audit error
1
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR678DGR
released
Audit error
1
DNase-seq
of smooth muscle cell of the brain vasculature
Homo sapiens
smooth muscle cell of the brain vasculature female
Lab:
AMP-T2D consortium
Project:
AMP