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Citing CMDGA
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Assay category
1
DNA accessibility
Assay
574
ChIP-seq
90
ATAC-seq
51
total RNA-seq
22
DNase-seq
21
pCHi-C
19
RRBS
10
Hi-C
8
WGBS
7
snATAC-seq
6
MeRIP-seq
6
single cell RNA-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
1
FAIRE-seq
Project
5
AMP
RFA
4
AMP2
1
AMP
Experiment status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
4
cell line
1
primary cell
Organ
2
kidney
2
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Life stage
4
unknown
1
newborn
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
tar
Library made from
4
RNA
1
DNA
Date released
4
August, 2021
1
October, 2019
Lab
4
Bing Ren, UCSD
1
AMP-T2D consortium
Replication type
5
isogenic
3
anisogenic
2
unreplicated
Showing 5 of 5 results
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Experiment
DSR894OMX
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR661CGV
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR090FJR
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR594DXF
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP