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Citing CMDGA
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Assay category
1
DNA methylation
Assay
484
ChIP-seq
113
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
1
GRCh38
Organism
1
Homo sapiens
Biosample type
47
primary cell
27
tissue
2
cell line
Organ
1
epithelium
1
liver
1
pancreas
Life stage
1
child
Available data
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
fastq
Platform
1
Illumina HiSeq X Ten
Run type
1
paired-ended
Read length (nt)
1
151
Library made from
1
DNA
Date released
1
February, 2023
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Showing 2 of 2 results
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Experiment
DSR465BDK
released
CRISPR genome editing followed by sgRNA sequencing
of EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP