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Citing CMDGA
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Assay category
7
DNA methylation
Assay
574
ChIP-seq
90
ATAC-seq
51
total RNA-seq
22
DNase-seq
21
pCHi-C
19
RRBS
10
Hi-C
7
WGBS
7
snATAC-seq
6
MeRIP-seq
6
single cell RNA-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
1
FAIRE-seq
Project
6
HPAP
1
AMP
RFA
6
HPAP
1
AMP
Experiment status
7
released
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Organ
6
epithelium
6
pancreas
1
liver
Life stage
5
adult
2
child
Available data
6
fastq
6
tsv
Platform
6
Illumina NovaSeq 6000
Illumina HiSeq X Ten
Run type
6
paired-ended
Read length (nt)
6
100
Library made from
7
DNA
Date released
6
February, 2021
1
July, 2019
Lab
6
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Replication type
63
unreplicated
7
isogenic
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Illumina HiSeq X Ten
Showing 7 of 7 results
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Experiment
DSR163MXE
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (3 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR992DXL
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR248ORP
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (46 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR791IRT
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female child (14 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR622ITI
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR892CSM
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (29 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR696NUE
released
WGBS
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP