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Citing CMDGA
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Assay category
7
DNA methylation
Assay
90
ChIP-seq
36
total RNA-seq
26
ATAC-seq
21
single cell RNA-seq
7
WGBS
Project
4
HPAP
3
AMP
RFA
4
HPAP
3
AMP
Experiment status
7
released
Genome assembly (visualization)
2
GRCh38
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Organ
5
pancreas
4
epithelium
2
adipose tissue
2
connective tissue
Life stage
7
adult
child
Available data
7
fastq
4
tsv
2
bam
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
Platform
4
Illumina NovaSeq 6000
3
Illumina HiSeq 2500
Run type
4
paired-ended
3
single-ended
Read length (nt)
38
101
7
100
4
151
Library made from
7
DNA
Date released
4
February, 2021
2
August, 2017
1
November, 2018
Lab
4
Klaus Kaestner, Upenn
3
AMP-T2D consortium
Replication type
4
isogenic
3
unreplicated
replicates.library.biosample.life_stage!
child
Showing 7 of 7 results
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Experiment
DSR992DXL
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR248ORP
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (46 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR622ITI
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR892CSM
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (29 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR575YHF
released
WGBS
of pancreas
Homo sapiens
pancreas female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR162898
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP